2024 Rice6k

Rice6k

Author: jmlb

August undefined, 2024

Tīmeklis(2014) Yu et al. Plant Biotechnology Journal. The advances in genotyping technology provide an opportunity to use genomic tools in crop breeding. As compared to field … Tīmeklis2016. gada 30. nov. · For genome-wide genotyping based on the RICE6K SNP array, DNA amplification, fragmentation, chip hybridization, single base extension, staining and scanning were conducted by the Life Science and ...

Development and evaluation of near-isogenic lines for brown …

TīmeklisMachines GEMM- Original Vendor DGEMM based netlib supplied Mflops IBM RS6K 530H 0.73 0.34 0.92 51.2 IBM RS6K 530H 0.78 0.34 0.92 51.2 IBM RS6K 250 0.77 … Tīmeklis2024. gada 4. febr. · The whole-genome single nucleotide polymorphism (SNP) array RICE6K was used to analyze the genetic background similarity between two selected pyramided lines and the recurrent parent C815S. This SNP array was developed based on Infinium technology and contains 5102 SNP and insertion-deletion (InDel) … broogly sharing

A whole-genome SNP array (RICE6K) for genomic breeding in rice ...

Tīmeklis2024. gada 22. nov. · Rice grain shape is one of the most important factors contributing to rice yield. Therefore, the identification of major or minor QTLs for grain shape is a longstanding goal in rice genetic research and breeding programs. In this study, a RICE6K SNP array with high-density SNP markers was used in genotyping to … Tīmeklis2024. gada 1. aug. · An additional set of selection markers were also developed based on the RICE6K and GSR40K assays to eliminate the residual background genome from donors in the BC 3 F 1, BC 4 F 1, and MF 3 (multiple-cross filial, MF) generations (Table S1). SNP array genotyping was performed as previously described [33]. 2.4. … Tīmeklis2024. gada 7. dec. · In this study, the RICE6K chip containing 4898 SNP and InDel markers was used to genotype an F 2 population, for which a high-resolution genetic linkage map was generated (Fig. 3) (Yu et al. 2014). The two parents in this study, GZ63-4S and TGMS29, were indica lines, and polymorphic SSR markers between … brook 14x14 glazed ceramic

Genotypes of Balilla and Nanjing11 at gene functional

Core single-nucleotide polymorphisms—a tool for genetic analysis …

Tīmeklis2013. gada 13. sept. · RICE6K contains 5102 SNP and insertion-deletion (InDel) markers, about 4500 of which were of high quality in the tested rice lines producing … Tīmeklis2024. gada 28. febr. · To determine the genotype precisely, a high-throughput Infinium RICE6K array (Illumina) containing 5102 SNP markers evenly distributed on the 12 … brook 3 piece set with cushionsTīmeklis2013. gada 13. sept. · RICE6K contains 5102 SNP and insertion–deletion (InDel) markers, about 4500 of which were of high quality in the tested rice lines producing … broohy trucks

"Tīmeklis2013. gada 20. dec. · Recently, a RICE6K SNP array has been developed based on the Illumina Bead Array platform and Infinium SNP assay technology for genome-wide … " - Rice6k

Rice6k

Improving rice blast resistance of Feng39S through molecular …

Tīmeklis2024. gada 17. okt. · RICE6K chip was used for screening genetic background of key plants. All seedlings were transplanted in the field in Wuhan, and NIL- S32 and PL-( … Tīmeklis2010. gada 1. dec. · Application tests of RICE6K showed that the array is suitable for rice germplasm fingerprinting, genotyping bulked segregating pools, seed authenticity check and genetic background selection, and suggests that RICE 6K provides an efficient and reliable genotypesing tool for rice genomic breeding.

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Tīmeklis2014. gada 1. marts · Rice ( Oryza sativa L.) is one of the most important crops, supplying food for over half of the world’s population. Its relatively simple and … Tīmeklis12 chromosomes of rice. RICE6K was developed based on re-sequencing data of more than 500 rice landraces. The RICE6K chip included 5636 representative SNPs that were selected from more than four million SNPs, and the chip was suitable for rice germplasm ﬁngerprinting, genotyping bulked

Tīmeklis2015. gada 24. dec. · Besides, two markers of C1F79 and C1R79 were developed to clean up the genetic background. In addition, two high-throughput arrays, RICE6K and RiceSNP50, containing 5102 and 51,478 InDel/SNP markers, respectively, were used to analyze the genetic background of intermediate materials and the improved lines … Tīmeklis2013. gada 13. sept. · RICE6K contains 5102 SNP and insertion-deletion (InDel) markers, about 4500 of which were of high quality in the tested rice lines producing …

Tīmeklis2024. gada 1. jūn. · SNP arrays including 44 K SNP array, RICE6K, RiceSNP50, C7AIR have been designed for rice molecular breeding. Recently, Zhang et al. [85] … Tīmeklis2016. gada 4. okt. · The genomic components of these NILs were detected using the whole-genome SNP (Single nucleotide polymorphism) array, RICE6K, suggesting that the recurrent parent genome (RPG) recovery of the NILs was 87.88, 87.70 and 86.62 %, respectively. BPH bioassays showed that the improved NILs and their derived …

TīmeklisRICE6K microarray (38) analysis revealed single nucleotide polymorphisms between the two pools from 17.16 to 19.9 Mb on chromosome 10 (SI Appendix, Fig. S5A), which …

Tīmeklis2024. gada 30. aug. · Previously, an Illumina Infinium 6 K array in rice (RICE6K) was developed in Wuhan, China to provide polymorphic SNPs within and between the indica and japonica subgroups for applications in background selection, mapping population genotyping, variety identification and purity tests, and bulk segregant analysis (Yu et … cardrecovery torrentTīmeklisAxiom Rice Genotyping Array includes 42,961 markers from GeneChip™ Rice 44K Genotyping Arrayand 5,499 markers from a whole-genome SNP array (RICE6K) for … card record not found on auth systemTīmeklis2024. gada 17. okt. · These results indicated that whole-genome background selection based on RICE6K SNP array greatly increased the efficiency and precision of genotyping. Fig. 3. Genetic background analysis of the four NILs detected by RICE6K. a NIL-Sa, b NIL-S32, c NIL-Sc, and d NIL-f5. The blue and red lines indicate the … card record your own messageTīmeklis2024. gada 9. sept. · 2 Rice Breeding Platform, International Rice Research Institute, DAPO Box 7777, Metro Manila, Philippines. [email protected]. 3 National Key Laboratory of Crop Genetic Improvement and National Centre of Plant Gene Research (Wuhan), Huazhong Agricultural University, Wuhan, China. [email protected]. … card record coversTīmeklis2016. gada 30. nov. · For genome-wide genotyping based on the RICE6K SNP array, DNA amplification, fragmentation, chip hybridization, single base extension, staining … card recovery for mac freeTīmeklis2024. gada 1. jūn. · SNP arrays including 44 K SNP array, RICE6K, RiceSNP50, C7AIR have been designed for rice molecular breeding. Recently, Zhang et al. [85] characterized the gene-CDS-haplotype (gcHap) diversity of 45,963 rice genes in 3010 rice accessions and found that haplotype-based GS had higher predictive ability than … brook 508 cafeTīmeklis2013. gada 13. sept. · RICE6K contains 5102 SNP and insertion-deletion (InDel) markers, about 4500 of which were of high quality in the tested rice lines producing highly repeatable results. Forty-five functional markers that are located inside 28 characterized genes of important traits can be detected using RICE6K. The SNP … card recovery for mac